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For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: DOT1L
wikigenes
PDBj
CellType: 293
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
DRX411731
Illumina NovaSeq 6000 paired end sequencing of SAMD00567565
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
DOT1L
Cell type
Cell type Class
Kidney
Cell type
293
Primary Tissue
Kidney
Tissue Diagnosis
Normal
Attributes by original data submitter
Sample
sample_name
293Tpa-fanChIP-DOT1L
age
Embryo
biomaterial_provider
Akihiko Yokoyama
cell_line
HEK293T(parent)
isolate
not applicable
sex
female
tissue
kidney
collection_date
missing
geo_loc_name
missing
Sequenced DNA Library
library_name
293Tpa-fanChIP-DOT1L
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
TruSeq ChIP Library Preparation Kit(Illumina, Inc.)
Sequencing Platform
instrument_model
Illumina NovaSeq 6000
Where can I get the processing logs?
Read processing pipeline
log
hg38
Number of total reads
54216955
Reads aligned (%)
87.2
Duplicates removed (%)
49.5
Number of peaks
1705 (qval < 1E-05)
hg19
Number of total reads
54216955
Reads aligned (%)
86.5
Duplicates removed (%)
50.1
Number of peaks
1093 (qval < 1E-05)
Base call quality data from
DBCLS SRA